Article Search
닫기

Microbiology and Biotechnology Letters

Genome Report(Note)

View PDF

Genome Report  |  Genome Report

Microbiol. Biotechnol. Lett. 2024; 52(3): 331-334

https://doi.org/10.48022/mbl.2408.08001

Received: August 2, 2024; Revised: September 2, 2024; Accepted: September 6, 2024

Complete Genome Sequence of Priestia megaterium Strain 10 Isolated from Soybean Rhizosphere (Glycine max)

Amani Sliti1 and Jae-Ho Shin1,2,3*

1Department of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea
2NGS Core Facility, Kyungpook National University, Daegu 41566, Republic of Korea
3Department of Integrative Biotechnology, Kyungpook National University, Daegu 41566, Republic of Korea

Correspondence to :
Jae-Ho Shin,      jhshin@knu.ac.kr

We present the complete genome sequence analysis of Priestia megaterium strain 10, isolated from the soybean rhizosphere. The genome consists of a single circular chromosome of 4,815,034 bp with a G+C content of 38.2% and 4 plasmids named P1 (198,305 bp), P2 (139,815 bp), P3 (79,328 bp), and P4 (61,901 bp).

Keywords: Complete genome, Priestia megaterium, rhizosphere, soybean

  1. Vezzani FM, Anderson C, Meenken E, Gillespie R, Peterson M, Beare MH. 2018. The importance of plants to development and maintenance of soil structure, microbial communities and ecosystem functions. Soil Tillage Res. 175: 139-149.
  2. Brilli F, Fares S, Ghirardo A, de Visser P, Calatayud V, Muñoz A, et al. 2018. Plants for sustainable improvement of indoor air quality. Trends Plant Sci. 23: 507-512.
  3. Majeed A, Muhammad Z, Ahmad H. 2018. Plant growth promoting bacteria: role in soil improvement, abiotic and biotic stress management of crops. Plant Cell Rep. 37: 1599-1609.
  4. Motaleb NA, Elhady SA, Ghoname A. 2020. AMF and Bacillus megaterium neutralize the harmful effects of salt stress on bean plants. Gesunde Pflanz. 72: 29-39.
  5. Wick RR, Judd LM, Holt KE. 2019. Performance of neural network basecalling tools for Oxford nanopore sequencing. Genome Biol. 20: 1-10.
  6. Kolmogorov M, Yuan J, Lin Y, Pevzner PA. 2019. Assembly of long, error-prone reads using repeat graphs. Nat. Biotechnol. 37: 540546.
  7. Tatusova T, DiCuccio M, Badretdin A, Chetvernin V, Nawrocki EP, Zaslavsky L, et al. 2016. NCBI prokaryotic genome annotation pipeline. Nucleic Acids Res. 44: 6614-6624.
  8. Overbeek R, Olson R, Pusch GD, Olsen GJ, Davis JJ, Disz T, et al. 2014. The SEED and the rapid annotation of microbial genomes using subsystems technology (RAST). Nucleic Acids Res. 42: D206D214.
  9. Grant JR, Enns E, Marinier E, Mandal A, Herman EK, Chen C-Y, et al. 2023. Proksee: in-depth characterization and visualization of bacterial genomes. Nucleic Acids Res. 51: W484-W492.
  10. Narayanasamy S, Thankappan S, Kumaravel S, Ragupathi S, Uthandi S. 2023. Complete genome sequence analysis of a plant growth-promoting phylloplane Bacillus altitudinis FD48 offers mechanistic insights into priming drought stress tolerance in rice. Genomics 115: 110550.
  11. Zamanzadeh-Nasrabadi SM, Mohammadiapanah F, HosseiniMazinani M, Sarikhan S. 2023. Salinity stress endurance of the plants with the aid of bacterial genes. Front. Genet. 14: 1049608.
  12. Singh P, Chauhan PK, Upadhyay SK, Singh RK, Dwivedi P, Wang J, et al. 2022. Mechanistic insights and potential use of siderophores producing microbes in rhizosphere for mitigation of stress in plants grown in degraded land. Front. Microbiol. 13:898979.
  13. Helué M-SP, Valeria V-R, Gustavo S, Sajjad H, Debasis M, Norma Á-A, Isela P-CF. 2024. Draft genome of a biological control agent against Bipolaris sorokiniana, the causal phytopathogen of spot blotch in wheat (Triticum turgidum L. subsp. durum): Bacillus inaquosorum TSO22. Open Agric. 9: 1000571-1000542.
  14. Castaldi S, Valkov VT, Ricca E, Chiurazzi M, Isticato R. 2023. Use of halotolerant Bacillus amyloliquefaciens RHF6 as a bio-based strategy for alleviating salinity stress in Lotus japonicus cv Gifu. Microbiol. Res. 268: 127274.
  15. Niazian M, Sadat-Noori SA, Tohidfar M, Mortazavian SMM, Sabbatini P. 2021. Betaine aldehyde dehydrogenase (BADH) vs. flavodoxin (Fld): Two important genes for enhancing plants stress tolerance and productivity. Front. Plant Sci. 12: 650215.

Starts of Metrics

Share this article on :

Related articles in MBL

Most Searched Keywords ?

What is Most Searched Keywords?

  • It is most registrated keyword in articles at this journal during for 2 years.